Ce module Python est une adaptation du plug-in
DM3_Reader (développé par Greg Jefferis) pour
ImageJ. Il permet d’extraire les données et méta-données des fichiers DM3 produits par le logiciel DigitalMicrograph de
GATAN.
This Python module is a transposition and adaptation of the
DM3_Reader ImageJ plug-in by Greg Jefferis.
This module was initially meant to be called by a script indexing electron microscope images into a database. It now allows to extract various metadata (specimen, operator, HV, MAG, etc.) from
GATAN DigitalMicrograph DM3 files. It may also extract and dump all metadata (“Tags”) and pass thumbnail and image data as PIL Images or Numpy arrays, as well as save the thumbnail view in a PNG file.
Use in your own script would typically require lines such as :
(initially published on the
ImageJ Wiki)
